Gm38618 Gene Detail

Summary

• Symbol
  Gm38618
• Name
  predicted gene, 38618

• Feature Type
  lncRNA gene
• IDs
  MGI:5621503
  NCBI Gene: 102642612
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:88433364-88439058 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  196 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5621503	lncRNA gene	Chr3:88433364-88439058 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  12 phenotype references
  

• All Mutations and Alleles
  22
• Chemically induced (other)
  1
• Gene trapped
  20
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm38618
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  3
• RefSeq
  1

• NCBI Gene
  102642612

Representative Sequences			Length	Strain/Species
genomic	102642612	NCBI Gene Model | MGI Sequence Detail	5695	C57BL/6J
transcript	XR_867447	RefSeq | MGI Sequence Detail	4732	C57BL/6J

References

• Summaries
  All 14

  Diseases 1

  Phenotypes 12
• Earliest
  J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-Le-Grand). 1999 Jul;45(5):737-50
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Gm38618:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr34046	Chr3:88438688-88438700 (-)	364 bp