About   Help   FAQ
Gm38804 Gene Detail
Summary
  • Symbol
    Gm38804
  • Name
    predicted gene, 38804
  • Synonyms
    Gm44119
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5621689
    NCBI Gene: 105242648
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:48586711-48591348 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, Syntenic
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    223 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5621689
 lncRNA gene Chr6:48586711-48599291 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004266
 antisense lncRNA gene Chr6:47565326-47573710 (-)
A/J MGP_AJ_G0004244
 antisense lncRNA gene Chr6:45404481-45412869 (-)
AKR/J MGP_AKRJ_G0004225
 antisense lncRNA gene Chr6:46998388-47006807 (-)
BALB/cJ MGP_BALBcJ_G0004231
 antisense lncRNA gene Chr6:45734351-45742770 (-)
C3H/HeJ MGP_C3HHeJ_G0004179
 antisense lncRNA gene Chr6:47004456-47012875 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004380
 antisense lncRNA gene Chr6:48682339-48690723 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003853
 antisense lncRNA gene Chr6:43033438-43041837 (-)
CAST/EiJ MGP_CASTEiJ_G0004141
 antisense lncRNA gene Chr6:46731346-46737345 (-)
CBA/J MGP_CBAJ_G0004173
 antisense lncRNA gene Chr6:50704388-50712807 (-)
DBA/2J MGP_DBA2J_G0004189
 antisense lncRNA gene Chr6:45321325-45329744 (-)
FVB/NJ MGP_FVBNJ_G0004205
 antisense lncRNA gene Chr6:44950975-44959394 (-)
LP/J MGP_LPJ_G0004267
 antisense lncRNA gene Chr6:47544930-47553314 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004195
 antisense lncRNA gene Chr6:53514144-53522532 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004377
 antisense lncRNA gene Chr6:46868205-46876589 (-)
PWK/PhJ MGP_PWKPhJ_G0004094
 antisense lncRNA gene Chr6:44854184-44862552 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004038
 antisense lncRNA gene Chr6:46218501-46228051 (-)
WSB/EiJ MGP_WSBEiJ_G0004177
 antisense lncRNA gene Chr6:46866587-46874975 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 105242648 NCBI Gene Model | MGI Sequence Detail 4638 C57BL/6J ±  kb
transcript XR_003956301 RefSeq | MGI Sequence Detail 3132 C57BL/6J  
For the selected sequence
Other
Accession IDs
less
MGI:5690511
References
more
  • Summaries
    All 4
  • Earliest
    J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory