Gm38997 Gene Detail

Summary

• Symbol
  Gm38997
• Name
  predicted gene, 38997
• Synonyms
  Gm44747

• Feature Type
  lncRNA gene
• IDs
  MGI:5621882
  NCBI Gene: 105242923
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:40661463-40682043 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  831 from dbSNP Build 142
• Strain Annotations
  5

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5621882	lncRNA gene	Chr7:40660210-40682043 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0007140	lincRNA gene	Chr7:39973603-40139866 (-)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0007305	lincRNA gene	Chr7:42707870-42741292 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0007066	lincRNA gene	Chr7:44041204-44073747 (-)
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0007110	lincRNA gene	Chr7:39382621-39424680 (-)
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm38997
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  10
• RefSeq
  2

• Ensembl
  ENSMUSG00000108364 (Evidence)
• NCBI Gene
  105242923

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108364	Ensembl Gene Model | MGI Sequence Detail	20581	C57BL/6J
transcript	ENSMUST00000205669	Ensembl | MGI Sequence Detail	304	Not Applicable

Other
Accession IDs

MGI:5753323

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;