Gm39035 Gene Detail

Summary

• Symbol
  Gm39035
• Name
  predicted gene, 39035

• Feature Type
  lncRNA gene
• IDs
  MGI:5621920
  NCBI Gene: 105242973
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:71956657-71958449 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  151 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5621920	lncRNA gene	Chr7:71956610-71973088 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm39035
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm39035
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  6
• RefSeq
  2

• Ensembl
  ENSMUSG00000120558 (Evidence)
• NCBI Gene
  105242973

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120558	Ensembl Gene Model | MGI Sequence Detail	1793	C57BL/6J
transcript	ENSMUST00000244156	Ensembl | MGI Sequence Detail	632	Not Applicable

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55

TSS for Gm39035:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr67176	Chr7:71956622-71956662 (+)	-15 bp