Gm41040 Gene Detail

Summary

• Symbol
  Gm41040
• Name
  predicted gene, 41040

• Feature Type
  lncRNA gene
• IDs
  MGI:5623925
  NCBI Gene: 105245610
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:100999910-101000359 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  153 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5623925	lncRNA gene	Chr13:100999910-101000359 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  1
• Transgenic
  1
• Genomic Mutations
  1 involving Gm41040
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  3
• RefSeq
  1

• NCBI Gene
  105245610

Representative Sequences			Length	Strain/Species
genomic	105245610	NCBI Gene Model | MGI Sequence Detail	450	C57BL/6J
transcript	XR_873869	RefSeq | MGI Sequence Detail	190	C57BL/6J

References

• Summaries
  All 8

  Diseases 1

  Phenotypes 6
• Earliest
  J:156741 Kuo YM, et al., Extensive enteric nervous system abnormalities in mice transgenic for artificial chromosomes containing Parkinson disease-associated alpha-synuclein gene mutations precede central nervous system changes. Hum Mol Genet. 2010 May 1;19(9):1633-50
• Latest
  J:344232 Chandra R, et al., Gut mucosal cells transfer alpha-synuclein to the vagus nerve. JCI Insight. 2023;8(23):e172192