Gm41235 Gene Detail

Summary

• Symbol
  Gm41235
• Name
  predicted gene, 41235

• Feature Type
  lncRNA gene
• IDs
  MGI:5624120
  NCBI Gene: 105245846
• Alliance
  gene page
• Transcription Start Sites
  7 TSS

Location &
Maps

• Sequence Map
  Chr14:103279911-103286176 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  282 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5624120	lncRNA gene	Chr14:103279911-103286176 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm41235
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  3
• RefSeq
  1

• NCBI Gene
  105245846

Representative Sequences			Length	Strain/Species
genomic	105245846	NCBI Gene Model | MGI Sequence Detail	6266	C57BL/6J
transcript	NR_168885	RefSeq | MGI Sequence Detail	3342	ZRU/MplStud

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:90438 Mouse Genome Informatics Scientific Curators, Obtaining and loading genome assembly coordinates from NCBI annotations. 2005;

TSS for Gm41235:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr130079	Chr14:103286175-103286191 (-)	-7 bp
Tssr130078	Chr14:103286150-103286170 (-)	16 bp
Tssr130077	Chr14:103286136-103286143 (-)	36 bp
Tssr130076	Chr14:103285861-103285872 (-)	309 bp
Tssr130075	Chr14:103285844-103285857 (-)	325 bp
Tssr130074	Chr14:103285799-103285818 (-)	367 bp
Tssr130073	Chr14:103284263-103284304 (-)	1,892 bp