Gm41472 Gene Detail

Summary

• Symbol
  Gm41472
• Name
  predicted gene, 41472

• Feature Type
  lncRNA gene
• IDs
  MGI:5624357
  NCBI Gene: 105246133
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr16:73277993-73305034 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  860 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5624357	lncRNA gene	Chr16:73277993-73305034 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Genomic Mutations
  1 involving Gm41472
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  3
• RefSeq
  1

• NCBI Gene
  105246133

Representative Sequences			Length	Strain/Species
genomic	105246133	NCBI Gene Model | MGI Sequence Detail	27042	C57BL/6J
transcript	XR_876158	RefSeq | MGI Sequence Detail	143	C57BL/6J

References

• Summaries
  All 3

  Phenotypes 1
• Earliest
  J:117029 Davisson M, et al., Impact of trisomy on fertility and meiosis in male mice. Hum Reprod. 2007 Feb;22(2):468-76

TSS for Gm41472:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr138999	Chr16:73294205-73294216 (+)	16,218 bp