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Gm42456 Gene Detail
Summary
  • Symbol
    Gm42456
  • Name
    predicted gene 42456
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5662593
    NCBI Gene: 115490145
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:137276848-137286924 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 5, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    269 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5662593
lncRNA gene Chr5:137272355-137286924 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006836
lincRNA gene Chr5:142004564-142020284 (-)
A/J MGP_AJ_G0006830
lincRNA gene Chr5:135822552-135840529 (-)
AKR/J MGP_AKRJ_G0006800
lincRNA gene Chr5:140224423-140242787 (-)
BALB/cJ MGP_BALBcJ_G0006806
lincRNA gene Chr5:137195545-137210254 (-)
C3H/HeJ MGP_C3HHeJ_G0006751
lincRNA gene Chr5:140881413-140897076 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006970
lincRNA gene Chr5:147260719-147277957 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006223
lincRNA gene Chr5:130079144-130094053 (-)
CAST/EiJ MGP_CASTEiJ_G0006673
lincRNA gene Chr5:140282916-140298319 (-)
CBA/J MGP_CBAJ_G0006733
lincRNA gene Chr5:153102125-153123180 (-)
DBA/2J MGP_DBA2J_G0006753
lincRNA gene Chr5:135734329-135749018 (-)
FVB/NJ MGP_FVBNJ_G0006777
lincRNA gene Chr5:134924228-134938787 (-)
LP/J MGP_LPJ_G0006837
lincRNA gene Chr5:142467423-142482034 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006760
lincRNA gene Chr5:155948974-155966158 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006973
lincRNA gene Chr5:140075560-140093846 (-)
PWK/PhJ MGP_PWKPhJ_G0006613
lincRNA gene Chr5:134810732-134826705 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006519
lincRNA gene Chr5:137637548-137655727 (-)
WSB/EiJ MGP_WSBEiJ_G0006724
lincRNA gene Chr5:140808876-140828901 (-)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 115490145 NCBI Gene Model | MGI Sequence Detail 10077 C57BL/6J ±  kb
transcript XR_004942658 RefSeq | MGI Sequence Detail 1589 C57BL/6J  
For the selected sequence
References
more
  • Summaries
    All 4
  • Earliest
    J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/12/2024
MGI 6.24
The Jackson Laboratory