Gm42482 Gene Detail

Summary

• Symbol
  Gm42482
• Name
  predicted gene 42482
• Synonyms
  RP23-458G12.2

• Feature Type
  unclassified gene
• IDs
  MGI:5662619
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:57955845-57957791 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  175 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5662619	unclassified gene	Chr5:57955845-57957791 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001545	unclassified gene	Chr5:57094375-57096321 (+)
A/J	MGP_AJ_G0001526	unclassified gene	Chr5:54982705-54984651 (+)
AKR/J	MGP_AKRJ_G0001512	unclassified gene	Chr5:56778091-56780037 (+)
BALB/cJ	MGP_BALBcJ_G0001522	unclassified gene	Chr5:55589041-55590987 (+)
C3H/HeJ	MGP_C3HHeJ_G0001499	unclassified gene	Chr5:57063634-57065580 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0001640	unclassified gene	Chr5:59386874-59388820 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001329	unclassified gene	Chr5:51784380-51786269 (+)
CAST/EiJ	MGP_CASTEiJ_G0001474	unclassified gene	Chr5:56067661-56069608 (+)
CBA/J	MGP_CBAJ_G0001490	unclassified gene	Chr5:61364852-61366798 (+)
DBA/2J	MGP_DBA2J_G0001495	unclassified gene	Chr5:55045657-55047603 (+)
FVB/NJ	MGP_FVBNJ_G0001502	unclassified gene	Chr5:54305748-54307694 (+)
LP/J	MGP_LPJ_G0001550	unclassified gene	Chr5:57479614-57481560 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001488	unclassified gene	Chr5:63095865-63097811 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001628	unclassified gene	Chr5:56383438-56385384 (+)
PWK/PhJ	MGP_PWKPhJ_G0001431	unclassified gene	Chr5:54085859-54087804 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0001400	unclassified gene	Chr5:55828308-55830236 (+)
WSB/EiJ	MGP_WSBEiJ_G0001491	unclassified gene	Chr5:56537872-56539817 (+)

Homology

• Gene Tree
  Gm42482
  

Expression

• Assay Results
  706
• Literature Summary
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000105050 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105050	Ensembl Gene Model | MGI Sequence Detail	1947	C57BL/6J

References

• Summaries
  All 3

  Developmental Gene Expression 1
• Earliest
  J:283645 Peng G, et al., Molecular architecture of lineage allocation and tissue organization in early mouse embryo. Nature. 2019 Aug;572(7770):528-532

TSS for Gm42482:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr46308	Chr5:57957715-57957728 (+)	1,877 bp