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Gm42744 Gene Detail
Summary
  • Symbol
    Gm42744
  • Name
    predicted gene 42744
  • Synonyms
    Gm30103
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5662881
    NCBI Gene: 102631881
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:4834753-4849094 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 5, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    608 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5662881
lncRNA gene Chr5:4834753-4849094 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006572
lincRNA gene Chr5:1657601-1677468 (-)
A/J MGP_AJ_G0006564
lincRNA gene Chr5:1578816-1593788 (-)
AKR/J MGP_AKRJ_G0006538
lincRNA gene Chr5:1588996-1606081 (-)
BALB/cJ MGP_BALBcJ_G0006538
lincRNA gene Chr5:1765569-1781769 (-)
C3H/HeJ MGP_C3HHeJ_G0006489
lincRNA gene Chr5:1772689-1787419 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006705
lincRNA gene Chr5:2012406-2030076 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005979
lincRNA gene Chr5:1697118-1709459 (-)
CAST/EiJ MGP_CASTEiJ_G0006418
lincRNA gene Chr5:1745427-1759343 (-)
CBA/J MGP_CBAJ_G0006472
lincRNA gene Chr5:1956354-1974099 (-)
DBA/2J MGP_DBA2J_G0006493
lincRNA gene Chr5:1716438-1732399 (-)
FVB/NJ MGP_FVBNJ_G0006514
lincRNA gene Chr5:1586647-1600072 (-)
LP/J MGP_LPJ_G0006573
lincRNA gene Chr5:1745538-1762193 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006501
lincRNA gene Chr5:1822712-1841145 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006709
lincRNA gene Chr5:1670771-1685914 (-)
PWK/PhJ MGP_PWKPhJ_G0006356
lincRNA gene Chr5:1637151-1654549 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006265
lincRNA gene Chr5:1939690-1951784 (-)
WSB/EiJ MGP_WSBEiJ_G0006465
lincRNA gene Chr5:1681639-1697602 (-)



Homology
less
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000105560 Ensembl Gene Model | MGI Sequence Detail 14342 C57BL/6J ±  kb
transcript ENSMUST00000196517 Ensembl | MGI Sequence Detail 2147 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
Other
Accession IDs
less
MGI:5589262
References
more
  • Summaries
    All 6
  • Earliest
    J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/09/2024
MGI 6.24
The Jackson Laboratory