Gm42928 Gene Detail

Summary

• Symbol
  Gm42928
• Name
  predicted gene 42928

• Feature Type
  unclassified gene
• IDs
  MGI:5663065
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:121217885-121221223 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  196 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663065	unclassified gene	Chr3:121217885-121221223 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0001245	unclassified gene	Chr3:123614095-123617433 (-)
A/J	MGP_AJ_G0001227	unclassified gene	Chr3:119495503-119498858 (-)
AKR/J	MGP_AKRJ_G0001212	unclassified gene	Chr3:122541045-122544399 (-)
BALB/cJ	MGP_BALBcJ_G0001221	unclassified gene	Chr3:119314897-119318242 (-)
C3H/HeJ	MGP_C3HHeJ_G0001199	unclassified gene	Chr3:122935781-122939145 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0001336	unclassified gene	Chr3:128096571-128099909 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001042	unclassified gene	Chr3:114929805-114933167 (-)
CAST/EiJ	MGP_CASTEiJ_G0001181	unclassified gene	Chr3:122304412-122307753 (-)
CBA/J	MGP_CBAJ_G0001190	unclassified gene	Chr3:132426702-132430054 (-)
DBA/2J	MGP_DBA2J_G0001195	unclassified gene	Chr3:118651656-118654987 (-)
FVB/NJ	MGP_FVBNJ_G0001205	unclassified gene	Chr3:116260090-116263435 (-)
LP/J	MGP_LPJ_G0001252	unclassified gene	Chr3:125136401-125139739 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001192	unclassified gene	Chr3:140063172-140067745 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001327	unclassified gene	Chr3:122089972-122093322 (-)
PWK/PhJ	MGP_PWKPhJ_G0001138	unclassified gene	Chr3:118344403-118347771 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0001114	unclassified gene	Chr3:120163263-120166607 (-)
WSB/EiJ	MGP_WSBEiJ_G0001198	unclassified gene	Chr3:122804832-122808899 (-)

Homology

• Gene Tree
  Gm42928
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000105813 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105813	Ensembl Gene Model | MGI Sequence Detail	3339	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm42928:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr35415	Chr3:121221121-121221139 (-)	93 bp