Gm43019 Gene Detail

Summary

• Symbol
  Gm43019
• Name
  predicted gene 43019

• Feature Type
  unclassified gene
• IDs
  MGI:5663156
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:132463410-132466272 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  174 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663156	unclassified gene	Chr5:132463410-132466272 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0001802	unclassified gene	Chr5:136691871-136694732 (-)
A/J	MGP_AJ_G0001779	unclassified gene	Chr5:130907996-130910858 (-)
AKR/J	MGP_AKRJ_G0001766	unclassified gene	Chr5:135150293-135153184 (-)
BALB/cJ	MGP_BALBcJ_G0001776	unclassified gene	Chr5:132249577-132252439 (-)
C3H/HeJ	MGP_C3HHeJ_G0001753	unclassified gene	Chr5:135690942-135693803 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0001897	unclassified gene	Chr5:141858928-141861790 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001563	unclassified gene	Chr5:125270478-125273240 (-)
CAST/EiJ	MGP_CASTEiJ_G0001724	unclassified gene	Chr5:135110924-135113798 (-)
CBA/J	MGP_CBAJ_G0001746	unclassified gene	Chr5:147429910-147432771 (-)
DBA/2J	MGP_DBA2J_G0001750	unclassified gene	Chr5:130851015-130853876 (-)
FVB/NJ	MGP_FVBNJ_G0001758	unclassified gene	Chr5:129961333-129964195 (-)
LP/J	MGP_LPJ_G0001805	unclassified gene	Chr5:137233601-137236463 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001739	unclassified gene	Chr5:150609175-150612037 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001886	unclassified gene	Chr5:134866630-134869492 (-)
PWK/PhJ	MGP_PWKPhJ_G0001684	unclassified gene	Chr5:129846591-129849371 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0001650	unclassified gene	Chr5:132463733-132466689 (-)
WSB/EiJ	MGP_WSBEiJ_G0001746	unclassified gene	Chr5:135585592-135588454 (-)

Homology

• Gene Tree
  Gm43019
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000106049 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106049	Ensembl Gene Model | MGI Sequence Detail	2863	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm43019:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr53588	Chr5:132466254-132466264 (-)	13 bp