Gm43333 Gene Detail

Summary

• Symbol
  Gm43333
• Name
  predicted gene 43333

• Feature Type
  unclassified gene
• IDs
  MGI:5663470
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:104217930-104220191 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  205 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663470	unclassified gene	Chr5:104217930-104220191 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0001676	unclassified gene	Chr5:105737781-105740041 (-)
A/J	MGP_AJ_G0001654	unclassified gene	Chr5:101759783-101762043 (-)
AKR/J	MGP_AKRJ_G0001642	unclassified gene	Chr5:105045664-105047924 (-)
BALB/cJ	MGP_BALBcJ_G0001651	unclassified gene	Chr5:102818768-102821028 (-)
C3H/HeJ	MGP_C3HHeJ_G0001630	unclassified gene	Chr5:105449600-105451861 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0001770	unclassified gene	Chr5:110059991-110062252 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001446	unclassified gene	Chr5:96892985-96895242 (-)
CAST/EiJ	MGP_CASTEiJ_G0001602	unclassified gene	Chr5:104156892-104159159 (-)
CBA/J	MGP_CBAJ_G0001621	unclassified gene	Chr5:113894014-113896275 (-)
DBA/2J	MGP_DBA2J_G0001624	unclassified gene	Chr5:101946795-101949055 (-)
FVB/NJ	MGP_FVBNJ_G0001633	unclassified gene	Chr5:100741832-100744093 (-)
LP/J	MGP_LPJ_G0001680	unclassified gene	Chr5:106303884-106306144 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001615	unclassified gene	Chr5:118825526-118827786 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001760	unclassified gene	Chr5:104578670-104580930 (-)
PWK/PhJ	MGP_PWKPhJ_G0001560	unclassified gene	Chr5:100406967-100409227 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0001526	unclassified gene	Chr5:102234690-102236963 (-)
WSB/EiJ	MGP_WSBEiJ_G0001621	unclassified gene	Chr5:104954952-104957213 (-)

Homology

• Gene Tree
  Gm43333
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000105261 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105261	Ensembl Gene Model | MGI Sequence Detail	2262	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm43333:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr52189	Chr5:104220777-104220786 (-)	-591 bp