Gm43511 Gene Detail

Summary

• Symbol
  Gm43511
• Name
  predicted gene 43511

• Feature Type
  unclassified gene
• IDs
  MGI:5663648
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:100946615-100948911 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  102 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663648	unclassified gene	Chr5:100946615-100948911 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001665	unclassified gene	Chr5:102310105-102312401 (+)
A/J	MGP_AJ_G0001646	unclassified gene	Chr5:98496049-98498345 (+)
AKR/J	MGP_AKRJ_G0001631	unclassified gene	Chr5:101734683-101736979 (+)
BALB/cJ	MGP_BALBcJ_G0001642	unclassified gene	Chr5:99521492-99523788 (+)
C3H/HeJ	MGP_C3HHeJ_G0001619	unclassified gene	Chr5:102083537-102086376 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0001759	unclassified gene	Chr5:106557383-106560377 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001436	unclassified gene	Chr5:93738832-93740940 (+)
CAST/EiJ	MGP_CASTEiJ_G0001591	unclassified gene	Chr5:100749036-100752156 (+)
CBA/J	MGP_CBAJ_G0001610	unclassified gene	Chr5:110254946-110257242 (+)
DBA/2J	MGP_DBA2J_G0001613	unclassified gene	Chr5:98684907-98687203 (+)
FVB/NJ	MGP_FVBNJ_G0001622	unclassified gene	Chr5:97487495-97489791 (+)
LP/J	MGP_LPJ_G0001669	unclassified gene	Chr5:102922051-102924347 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001604	unclassified gene	Chr5:115313620-115315916 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001749	unclassified gene	Chr5:101217974-101220270 (+)
PWK/PhJ	MGP_PWKPhJ_G0001549	unclassified gene	Chr5:97120403-97122737 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0001515	unclassified gene	Chr5:98889767-98891865 (+)
WSB/EiJ	MGP_WSBEiJ_G0001610	unclassified gene	Chr5:101553840-101556136 (+)

Homology

• Gene Tree
  Gm43511
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000104761 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104761	Ensembl Gene Model | MGI Sequence Detail	2297	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm43511:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr47489	Chr5:100946601-100946636 (+)	4 bp