Gm43682 Gene Detail

Summary

• Symbol
  Gm43682
• Name
  predicted gene 43682

• Feature Type
  unclassified gene
• IDs
  MGI:5663819
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:93324829-93326918 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  124 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5663819	unclassified gene	Chr5:93324829-93326918 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001653	unclassified gene	Chr5:94397991-94400080 (+)
A/J	MGP_AJ_G0001634	unclassified gene	Chr5:90642553-90644642 (+)
AKR/J	MGP_AKRJ_G0001619	unclassified gene	Chr5:93631463-93633552 (+)
BALB/cJ	MGP_BALBcJ_G0001630	unclassified gene	Chr5:91521389-91523478 (+)
C3H/HeJ	MGP_C3HHeJ_G0001607	unclassified gene	Chr5:94013966-94016055 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0001747	unclassified gene	Chr5:98138724-98140813 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001425	unclassified gene	Chr5:86267570-86269671 (+)
CAST/EiJ	MGP_CASTEiJ_G0001580	unclassified gene	Chr5:93400936-93403034 (+)
CBA/J	MGP_CBAJ_G0001598	unclassified gene	Chr5:101554508-101556597 (+)
DBA/2J	MGP_DBA2J_G0001601	unclassified gene	Chr5:90690862-90692951 (+)
FVB/NJ	MGP_FVBNJ_G0001610	unclassified gene	Chr5:89550979-89553068 (+)
LP/J	MGP_LPJ_G0001657	unclassified gene	Chr5:94763145-94765234 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001592	unclassified gene	Chr5:106432312-106434401 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001737	unclassified gene	Chr5:93144599-93146688 (+)
PWK/PhJ	MGP_PWKPhJ_G0001538	unclassified gene	Chr5:89757858-89759957 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0001504	unclassified gene	Chr5:92481602-92483790 (+)
WSB/EiJ	MGP_WSBEiJ_G0001598	unclassified gene	Chr5:93612083-93614172 (+)

Homology

• Gene Tree
  Gm43682
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000107019 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107019	Ensembl Gene Model | MGI Sequence Detail	2090	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm43682:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr47376	Chr5:93323211-93323214 (+)	-1,616 bp