Gm43909 Gene Detail

Summary

• Symbol
  Gm43909
• Name
  predicted gene, 43909

• Feature Type
  unclassified gene
• IDs
  MGI:5690301
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr6:145809023-145810898 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  42 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690301	unclassified gene	Chr6:145809023-145810898 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002114	unclassified gene	Chr6:150895852-150897727 (+)
A/J	MGP_AJ_G0002089	unclassified gene	Chr6:144917436-144919311 (+)
AKR/J	MGP_AKRJ_G0002076	unclassified gene	Chr6:149226661-149228545 (+)
BALB/cJ	MGP_BALBcJ_G0002086	unclassified gene	Chr6:144668026-144669901 (+)
C3H/HeJ	MGP_C3HHeJ_G0002062	unclassified gene	Chr6:149274502-149276387 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002210	unclassified gene	Chr6:154949651-154951526 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001835	unclassified gene	Chr6:143652786-143654662 (+)
CAST/EiJ	MGP_CASTEiJ_G0002029	unclassified gene	Chr6:148905774-148907676 (+)
CBA/J	MGP_CBAJ_G0002056	unclassified gene	Chr6:160826948-160828825 (+)
DBA/2J	MGP_DBA2J_G0002061	unclassified gene	Chr6:143706576-143708461 (+)
FVB/NJ	MGP_FVBNJ_G0002070	unclassified gene	Chr6:142434329-142436210 (+)
LP/J	MGP_LPJ_G0002114	unclassified gene	Chr6:150995513-150997388 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002045	unclassified gene	Chr6:164605040-164606943 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002199	unclassified gene	Chr6:149059732-149061617 (+)
PWK/PhJ	MGP_PWKPhJ_G0001990	unclassified gene	Chr6:142211311-142213190 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0001951	unclassified gene	Chr6:147215223-147217089 (+)
WSB/EiJ	MGP_WSBEiJ_G0002054	unclassified gene	Chr6:149674220-149676095 (+)

Homology

• Gene Tree
  Gm43909
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000108126 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108126	Ensembl Gene Model | MGI Sequence Detail	1876	C57BL/6J

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm43909:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr59561	Chr6:145808476-145808490 (+)	-540 bp
Tssr59562	Chr6:145809570-145809612 (+)	568 bp