Gm43977 Pseudogene Detail

Summary

• Symbol
  Gm43977
• Name
  predicted gene, 43977

• Feature Type
  pseudogene
• IDs
  MGI:5690369
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:129824011-129824199 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  74 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690369	pseudogene	Chr10:129824011-129824199 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039958	pseudogene	Chr10:133924531-133924719 (-)
A/J	MGP_AJ_G0039967	pseudogene	Chr10:128519225-128519413 (-)
AKR/J	MGP_AKRJ_G0039886	pseudogene	Chr10:132261920-132262108 (-)
BALB/cJ	MGP_BALBcJ_G0039944	pseudogene	Chr10:128927742-128927930 (-)
C3H/HeJ	MGP_C3HHeJ_G0039591	pseudogene	Chr10:132430854-132431042 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0040522	pseudogene	Chr10:138459242-138459430 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037081	pseudogene	Chr10:122286341-122286511 (-)
CAST/EiJ	MGP_CASTEiJ_G0038700	pseudogene	Chr10:133184824-133185012 (-)
CBA/J	MGP_CBAJ_G0039560	pseudogene	Chr10:144044814-144045002 (-)
DBA/2J	MGP_DBA2J_G0039757	pseudogene	Chr10:127603391-127603579 (-)
FVB/NJ	MGP_FVBNJ_G0039722	pseudogene	Chr10:126500896-126501084 (-)
LP/J	MGP_LPJ_G0039794	pseudogene	Chr10:134481015-134481203 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039707	pseudogene	Chr10:146655780-146655968 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040613	pseudogene	Chr10:132331273-132331461 (-)
PWK/PhJ	MGP_PWKPhJ_G0038376	pseudogene	Chr10:127747850-127748038 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038108	pseudogene	Chr10:131382667-131382855 (-)
WSB/EiJ	MGP_WSBEiJ_G0038920	pseudogene	Chr10:132596960-132597148 (-)

Homology

• Gene Tree
  Gm43977
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000107423 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107423	Ensembl Gene Model | MGI Sequence Detail	189	C57BL/6J
transcript	ENSMUST00000203970	Ensembl | MGI Sequence Detail	189	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;