Gm44041 Pseudogene Detail

Summary

• Symbol
  Gm44041
• Name
  predicted gene, 44041

• Feature Type
  pseudogene
• IDs
  MGI:5690433
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:47824677-47825072 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  69 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690433	pseudogene	Chr6:47824677-47825072 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013438	pseudogene	Chr6:46755764-46756159 (+)
A/J	MGP_AJ_G0013422	pseudogene	Chr6:44601611-44602007 (+)
AKR/J	MGP_AKRJ_G0013386	pseudogene	Chr6:46155413-46155809 (+)
BALB/cJ	MGP_BALBcJ_G0013400	pseudogene	Chr6:44954711-44955107 (+)
C3H/HeJ	MGP_C3HHeJ_G0013250	pseudogene	Chr6:46179949-46180345 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013784	pseudogene	Chr6:47772106-47772501 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011876	pseudogene	Chr6:42316281-42316934 (+)
CAST/EiJ	MGP_CASTEiJ_G0012959	pseudogene	Chr6:45909978-45910373 (+)
CBA/J	MGP_CBAJ_G0013219	pseudogene	Chr6:49797778-49798174 (+)
DBA/2J	MGP_DBA2J_G0013303	pseudogene	Chr6:44548209-44548605 (+)
FVB/NJ	MGP_FVBNJ_G0013299	pseudogene	Chr6:44182484-44182880 (+)
LP/J	MGP_LPJ_G0013372	pseudogene	Chr6:46655996-46656391 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013317	pseudogene	Chr6:52674702-52675098 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013779	pseudogene	Chr6:46066225-46066620 (+)
PWK/PhJ	MGP_PWKPhJ_G0012771	pseudogene	Chr6:44066894-44067289 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012552	pseudogene	Chr6:45489284-45489889 (+)
WSB/EiJ	MGP_WSBEiJ_G0013000	pseudogene	Chr6:46066071-46066467 (+)

Homology

• Gene Tree
  Gm44041
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000107604 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107604	Ensembl Gene Model | MGI Sequence Detail	396	C57BL/6J
transcript	ENSMUST00000203678	Ensembl | MGI Sequence Detail	396	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;