Gm44085 Gene Detail

Summary

• Symbol
  Gm44085
• Name
  predicted gene, 44085

• Feature Type
  lncRNA gene
• IDs
  MGI:5690477
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:146893865-146895522 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  126 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690477	lncRNA gene	Chr6:146893865-146895522 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0004396	antisense lncRNA gene	Chr6:152030145-152031791 (-)
A/J	MGP_AJ_G0004373	antisense lncRNA gene	Chr6:145997689-145999335 (-)
AKR/J	MGP_AKRJ_G0004355	antisense lncRNA gene	Chr6:150342503-150344160 (-)
BALB/cJ	MGP_BALBcJ_G0004359	antisense lncRNA gene	Chr6:145757569-145759215 (-)
C3H/HeJ	MGP_C3HHeJ_G0004308	antisense lncRNA gene	Chr6:150385381-150387038 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004509	antisense lncRNA gene	Chr6:156071235-156072892 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003968	antisense lncRNA gene	Chr6:144735487-144737168 (-)
CAST/EiJ	MGP_CASTEiJ_G0004268	antisense lncRNA gene	Chr6:150030230-150031870 (-)
CBA/J	MGP_CBAJ_G0004302	antisense lncRNA gene	Chr6:162031828-162033385 (-)
DBA/2J	MGP_DBA2J_G0004317	antisense lncRNA gene	Chr6:144779232-144780889 (-)
FVB/NJ	MGP_FVBNJ_G0004334	antisense lncRNA gene	Chr6:143518284-143519930 (-)
LP/J	MGP_LPJ_G0004396	antisense lncRNA gene	Chr6:152109312-152110869 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004325	antisense lncRNA gene	Chr6:165755575-165757221 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004506	antisense lncRNA gene	Chr6:150160965-150162622 (-)
PWK/PhJ	MGP_PWKPhJ_G0004221	antisense lncRNA gene	Chr6:143300674-143302453 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0004163	antisense lncRNA gene	Chr6:148314142-148315775 (-)
WSB/EiJ	MGP_WSBEiJ_G0004307	antisense lncRNA gene	Chr6:150784445-150786002 (-)

Homology

• Gene Tree
  Gm44085
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000107969 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107969	Ensembl Gene Model | MGI Sequence Detail	1658	C57BL/6J
transcript	ENSMUST00000205056	Ensembl | MGI Sequence Detail	372	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;