Gm44129 Gene Detail

Summary

• Symbol
  Gm44129
• Name
  predicted gene, 44129

• Feature Type
  lncRNA gene
• IDs
  MGI:5690521
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:12608995-12658955 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1367 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690521	lncRNA gene	Chr6:12608995-12658955 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0006902	lincRNA gene	Chr6:9640822-9686581 (+)
A/J	MGP_AJ_G0006896	lincRNA gene	Chr6:9301453-9343831 (+)
AKR/J	MGP_AKRJ_G0006866	lincRNA gene	Chr6:9617728-9664712 (+)
BALB/cJ	MGP_BALBcJ_G0006872	lincRNA gene	Chr6:9298491-9335647 (+)
C3H/HeJ	MGP_C3HHeJ_G0006817	lincRNA gene	Chr6:9519523-9573473 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007037	lincRNA gene	Chr6:10044461-10094463 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006285	lincRNA gene	Chr6:8584243-8621044 (+)
CAST/EiJ	MGP_CASTEiJ_G0006735	lincRNA gene	Chr6:9390808-9429188 (+)
CBA/J	MGP_CBAJ_G0006799	lincRNA gene	Chr6:10215593-10262197 (+)
DBA/2J	MGP_DBA2J_G0006819	lincRNA gene	Chr6:9225479-9272238 (+)
FVB/NJ	MGP_FVBNJ_G0006842	lincRNA gene	Chr6:9133563-9184009 (+)
LP/J	MGP_LPJ_G0006902	lincRNA gene	Chr6:9613662-9659222 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006824	lincRNA gene	Chr6:10916890-10974129 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007039	lincRNA gene	Chr6:9504070-9555050 (+)
PWK/PhJ	MGP_PWKPhJ_G0006677	lincRNA gene	Chr6:8975060-9013603 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0006585	lincRNA gene	Chr6:9444344-9484470 (+)
WSB/EiJ	MGP_WSBEiJ_G0006790	lincRNA gene	Chr6:9419919-9459926 (+)

Homology

• Gene Tree
  Gm44129
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000107422 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107422	Ensembl Gene Model | MGI Sequence Detail	49961	C57BL/6J
transcript	ENSMUST00000203511	Ensembl | MGI Sequence Detail	675	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;