Gm44151 Gene Detail

Summary

• Symbol
  Gm44151
• Name
  predicted gene, 44151

• Feature Type
  lncRNA gene
• IDs
  MGI:5690543
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:3440112-3449442 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  70 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690543	lncRNA gene	Chr7:3440112-3449442 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0004401	antisense lncRNA gene	Chr7:309687-319017 (-)
A/J	MGP_AJ_G0004378	antisense lncRNA gene	Chr7:300175-309616 (-)
AKR/J	MGP_AKRJ_G0004360	antisense lncRNA gene	Chr7:296011-305446 (-)
BALB/cJ	MGP_BALBcJ_G0004364	antisense lncRNA gene	Chr7:301521-311708 (-)
C3H/HeJ	MGP_C3HHeJ_G0004313	antisense lncRNA gene	Chr7:305867-315815 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004513	antisense lncRNA gene	Chr7:308581-318007 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003973	antisense lncRNA gene	Chr7:196746-206025 (-)
CAST/EiJ	MGP_CASTEiJ_G0004273	antisense lncRNA gene	Chr7:302591-313640 (-)
CBA/J	MGP_CBAJ_G0004307	antisense lncRNA gene	Chr7:409870-422688 (-)
DBA/2J	MGP_DBA2J_G0004322	antisense lncRNA gene	Chr7:292942-302134 (-)
FVB/NJ	MGP_FVBNJ_G0004340	antisense lncRNA gene	Chr7:290005-299339 (-)
LP/J	MGP_LPJ_G0004402	antisense lncRNA gene	Chr7:306719-316016 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004331	antisense lncRNA gene	Chr7:339040-348489 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004512	antisense lncRNA gene	Chr7:288236-297676 (-)
PWK/PhJ	MGP_PWKPhJ_G0004226	antisense lncRNA gene	Chr7:435243-444817 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0004168	antisense lncRNA gene	Chr7:367983-377398 (-)
WSB/EiJ	MGP_WSBEiJ_G0004312	antisense lncRNA gene	Chr7:297330-306642 (-)

Homology

• Gene Tree
  Gm44151
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000107862 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107862	Ensembl Gene Model | MGI Sequence Detail	9331	C57BL/6J
transcript	ENSMUST00000204704	Ensembl | MGI Sequence Detail	259	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;