Gm44250 Gene Detail

Summary

• Symbol
  Gm44250
• Name
  predicted gene, 44250

• Feature Type
  unclassified gene
• IDs
  MGI:5690642
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr6:5216258-5220486 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  219 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690642	unclassified gene	Chr6:5216258-5220486 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0001850	unclassified gene	Chr6:2046867-2054832 (-)
A/J	MGP_AJ_G0001827	unclassified gene	Chr6:1967860-1972211 (-)
AKR/J	MGP_AKRJ_G0001814	unclassified gene	Chr6:2021496-2026328 (-)
BALB/cJ	MGP_BALBcJ_G0001824	unclassified gene	Chr6:1942083-1946571 (-)
C3H/HeJ	MGP_C3HHeJ_G0001801	unclassified gene	Chr6:1994489-1999426 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0001946	unclassified gene	Chr6:2111413-2116467 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0001770	unclassified gene	Chr6:1999054-2004729 (-)
CBA/J	MGP_CBAJ_G0001794	unclassified gene	Chr6:2151765-2155755 (-)
DBA/2J	MGP_DBA2J_G0001798	unclassified gene	Chr6:1922586-1926483 (-)
FVB/NJ	MGP_FVBNJ_G0001806	unclassified gene	Chr6:1931565-1938473 (-)
LP/J	MGP_LPJ_G0001853	unclassified gene	Chr6:2004195-2007916 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001786	unclassified gene	Chr6:2243186-2247167 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001935	unclassified gene	Chr6:1976026-1979963 (-)
PWK/PhJ	MGP_PWKPhJ_G0001731	unclassified gene	Chr6:1867852-1872042 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0001697	unclassified gene	Chr6:2037379-2052039 (-)
WSB/EiJ	MGP_WSBEiJ_G0001794	unclassified gene	Chr6:1982798-1987245 (-)

Homology

• Gene Tree
  Gm44250
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000107881 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107881	Ensembl Gene Model | MGI Sequence Detail	4229	C57BL/6J

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm44250:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr59742	Chr6:5220930-5220949 (-)	-454 bp
Tssr59741	Chr6:5220487-5220501 (-)	-8 bp