Gm44317 Gene Detail

Summary

• Symbol
  Gm44317
• Name
  predicted gene, 44317

• Feature Type
  lncRNA gene
• IDs
  MGI:5690709
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:119547902-119555018 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  200 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5690709	lncRNA gene	Chr6:119547902-119555018 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004346	antisense lncRNA gene	Chr6:122391322-122398435 (+)
A/J	MGP_AJ_G0004323	antisense lncRNA gene	Chr6:117693652-117700765 (+)
AKR/J	MGP_AKRJ_G0004306	antisense lncRNA gene	Chr6:120845414-120852527 (+)
BALB/cJ	MGP_BALBcJ_G0004309	antisense lncRNA gene	Chr6:117469004-117476105 (+)
C3H/HeJ	MGP_C3HHeJ_G0004195	antisense lncRNA gene	Chr6:63440489-63447590 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004459	antisense lncRNA gene	Chr6:125525298-125532416 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003926	antisense lncRNA gene	Chr6:114613074-114620034 (+)
CAST/EiJ	MGP_CASTEiJ_G0004220	antisense lncRNA gene	Chr6:121300596-121307691 (+)
CBA/J	MGP_CBAJ_G0004252	antisense lncRNA gene	Chr6:130490169-130497270 (+)
DBA/2J	MGP_DBA2J_G0004267	antisense lncRNA gene	Chr6:116600395-116607508 (+)
FVB/NJ	MGP_FVBNJ_G0004284	antisense lncRNA gene	Chr6:115718777-115725895 (+)
LP/J	MGP_LPJ_G0004347	antisense lncRNA gene	Chr6:122394441-122402293 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004275	antisense lncRNA gene	Chr6:134486113-134493226 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004456	antisense lncRNA gene	Chr6:120897792-120904893 (+)
PWK/PhJ	MGP_PWKPhJ_G0004173	antisense lncRNA gene	Chr6:115616112-115623206 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004116	antisense lncRNA gene	Chr6:119617384-119624507 (+)
WSB/EiJ	MGP_WSBEiJ_G0004257	antisense lncRNA gene	Chr6:121171229-121178342 (+)

Homology

• Gene Tree
  Gm44317
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108282 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108282	Ensembl Gene Model | MGI Sequence Detail	7117	C57BL/6J
transcript	ENSMUST00000204314	Ensembl | MGI Sequence Detail	4214	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;