Gm44521 Pseudogene Detail

Summary

• Symbol
  Gm44521
• Name
  predicted gene 44521

• Feature Type
  pseudogene
• IDs
  MGI:5753097
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:41117074-41117290 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  5

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753097	pseudogene	Chr7:41117074-41117290 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013878	pseudogene	Chr7:41173357-41173558 (-)
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0014288	pseudogene	Chr7:43264320-43265006 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0013823	pseudogene	Chr7:41704621-41704822 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0014244	pseudogene	Chr7:40772912-40773282 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm44521
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  7

• Ensembl
  ENSMUSG00000108312 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108312	Ensembl Gene Model | MGI Sequence Detail	217	C57BL/6J
transcript	ENSMUST00000206469	Ensembl | MGI Sequence Detail	217	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;