Gm44684 Gene Detail

Summary

• Symbol
  Gm44684
• Name
  predicted gene 44684

• Feature Type
  lncRNA gene
• IDs
  MGI:5753260
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:27374084-27377269 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  23 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753260	lncRNA gene	Chr7:27374084-27377269 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0015659	unclassified non-coding RNA gene	Chr7:26358704-26361904 (-)
A/J	MGP_AJ_G0015637	unclassified non-coding RNA gene	Chr7:25709554-25712751 (-)
AKR/J	MGP_AKRJ_G0015600	unclassified non-coding RNA gene	Chr7:26397856-26401053 (-)
BALB/cJ	MGP_BALBcJ_G0015599	unclassified non-coding RNA gene	Chr7:25923328-25926525 (-)
C3H/HeJ	MGP_C3HHeJ_G0015420	unclassified non-coding RNA gene	Chr7:26773618-26776803 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0016052	unclassified non-coding RNA gene	Chr7:27243658-27246843 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013784	unclassified non-coding RNA gene	Chr7:26927231-26930719 (-)
CAST/EiJ	MGP_CASTEiJ_G0014976	unclassified non-coding RNA gene	Chr7:20103734-20107147 (-)
CBA/J	MGP_CBAJ_G0015401	unclassified non-coding RNA gene	Chr7:28446232-28449417 (-)
DBA/2J	MGP_DBA2J_G0015496	unclassified non-coding RNA gene	Chr7:25499315-25502500 (-)
FVB/NJ	MGP_FVBNJ_G0015503	unclassified non-coding RNA gene	Chr7:25606429-25609614 (-)
LP/J	MGP_LPJ_G0015576	unclassified non-coding RNA gene	Chr7:26696404-26699589 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015525	unclassified non-coding RNA gene	Chr7:27994710-27997895 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0016094	unclassified non-coding RNA gene	Chr7:25933165-25936376 (-)
PWK/PhJ	MGP_PWKPhJ_G0014758	unclassified non-coding RNA gene	Chr7:20553653-20557082 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0014547	unclassified non-coding RNA gene	Chr7:16916018-16919479 (-)
WSB/EiJ	MGP_WSBEiJ_G0015081	unclassified non-coding RNA gene	Chr7:26229925-26233120 (-)

Homology

• Gene Tree
  Gm44684
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108520 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108520	Ensembl Gene Model | MGI Sequence Detail	3186	C57BL/6J
transcript	ENSMUST00000205388	Ensembl | MGI Sequence Detail	2926	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;