Apoc2l MGI Mouse Gene Detail - MGI:5753381

Apoc2l Gene Detail

Sequence Map

Chr7:19405509-19415348 bp, - strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Vertebrate Orthology Source

Alliance of Genome Resources

MGI Vertebrate Homology

Apoc2l stringent orthology
1 human;1 mouse;1 rat;1 zebrafish
HCOP

vertebrate homology predictions: APOC2
Gene Tree

Apoc2l

				Human Disease	Mouse Models
				familial apolipoprotein C-II deficiency IDs familial apolipoprotein C-II deficiency DOID:0111418 MESH:D008072 OMIM:207750 ORDO:309020 UMLS_CUI:C0268199 UMLS_CUI:C1720779
				familial hyperlipidemia IDs familial hyperlipidemia DOID:1168 DOID:3147 ICD10CM:E78.5 MESH:D006949 MESH:D006951 NCI:C34707 NCI:C34709 UMLS_CUI:C0020473 UMLS_CUI:C0020476
				multiple sclerosis IDs multiple sclerosis DOID:2377 ICD10CM:G35 ICD9CM:340 MESH:D009103 NCI:C3243 OMIM:612594 OMIM:612595 OMIM:612596 UMLS_CUI:C0026769

Click on a disease name to see all genes associated with that disease.

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Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	RNA binding	signaling receptor activity	signaling receptor binding	transcription	transferase	transporter

Biological Process

carbohydrate derivative metabolism	cell differentiation	cell population proliferation	cellular component organization	DNA-templated transcription	establishment of localization	homeostatic process	immune system process	lipid metabolic process	programmed cell death	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	membraneless organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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			Length	Strain/Species	Flank
genomic	ENSMUSG00000109350	Ensembl Gene Model \| MGI Sequence Detail	9840	C57BL/6J	± kb
transcript	ENSMUST00000127648	Ensembl \| MGI Sequence Detail	765	Not Applicable
polypeptide	ENSMUSP00000118305	Ensembl \| MGI Sequence Detail	97	Not Applicable

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MGI:6729912

Summaries

All 10

Gene Ontology 2
Earliest

J:3792 Hoffer MJ, et al., Evolutionary conservation of the mouse apolipoprotein e-c1-c2 gene cluster: structure and genetic variability in inbred mice. Genomics. 1993 Jan;15(1):62-7
Latest

J:13246 Hoffer MJ, et al., Structure and expression of the mouse apolipoprotein C2 gene. Genomics. 1993 Jul;17(1):45-51

TSS for Apoc2l:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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