Gm46901 Gene Detail

Summary

• Symbol
  Gm46901
• Name
  predicted gene, 46901
• Synonyms
  Gm17739

• Feature Type
  lncRNA gene
• IDs
  MGI:5826538
  NCBI Gene: 108169023
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:9208517-9210910 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 3.69 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  111 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5826538	lncRNA gene	Chr5:9208517-9210910 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Expression

• cDNA Data
  4

• Other Mouse Links
  Allen Institute

Sequences &
Gene Models

• All Sequences
  7
• RefSeq
  1
• UniProt
  1

• NCBI Gene
  108169023

Representative Sequences			Length	Strain/Species
genomic	108169023	NCBI Gene Model | MGI Sequence Detail	2394	C57BL/6J
transcript	NR_166570	RefSeq | MGI Sequence Detail	2394	C57BL/6
polypeptide	Q3UQI1	UniProt | EBI | MGI Sequence Detail	58	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 4

  cDNA 4

Other
Accession IDs

MGI:5009815

References

• Summaries
  All 6
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:90438 Mouse Genome Informatics Scientific Curators, Obtaining and loading genome assembly coordinates from NCBI annotations. 2005;

TSS for Gm46901:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr50104	Chr5:9210908-9210912 (-)	0 bp