Gm48725 Pseudogene Detail

Summary

• Symbol
  Gm48725
• Name
  predicted gene, 48725

• Feature Type
  pseudogene
• IDs
  MGI:6098383
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:57416435-57416617 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  110 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6098383	pseudogene	Chr14:57416435-57416617 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm48725
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm48725
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000114530 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114530	Ensembl Gene Model | MGI Sequence Detail	183	C57BL/6J
transcript	ENSMUST00000225618	Ensembl | MGI Sequence Detail	183	Not Applicable

References

• Summaries
  All 2

  Diseases 1

  Phenotypes 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:345081 Dominguez-Ruiz M, et al., A Murine Model for the del(GJB6-D13S1830) Deletion Recapitulating the Phenotype of Human DFNB1 Hearing Impairment: Generation and Functional and Histopathological Study. 2024;