Rr61 Other Genome Feature Detail

Summary

• Symbol
  Rr61
• Name
  regulatory region 61
• Synonyms
  hs1262

• Feature Type
  enhancer
• IDs
  MGI:6197935
• Regulates expression of
  Shox2 (1 regulated gene)

Location &
Maps

• Sequence Map
  Chr3:66845656-66847450 bp, . strand

  From VISTA annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  82 from dbSNP Build 142

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Endonuclease-mediated
  1
• Targeted
  1
• Genomic Mutations
  1 involving Rr61
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  1

Representative Sequences			Length	Strain/Species
genomic	hs1262	VISTA | MGI Sequence Detail	1795	Not Applicable

Other Database
Links

VISTA Enhancer Element

hs1262

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:261810 Osterwalder M, et al., Enhancer redundancy provides phenotypic robustness in mammalian development. Nature. 2018 Feb 8;554(7691):239-243
• Latest
  J:355648 Abassah-Oppong S, et al., A gene desert required for regulatory control of pleiotropic Shox2 expression and embryonic survival. Nat Commun. 2024 Oct 10;15(1):8793

Rr61 regulates expression of:

Feature	Feature Type	Location	Reference
Shox2, SHOX homeobox 2	protein coding gene	Chr3:66879060-66889104 (-)	J:261810