Gm51806 Gene Detail

Summary

• Symbol
  Gm51806
• Name
  predicted gene, 51806

• Feature Type
  lncRNA gene
• IDs
  MGI:6365661
  NCBI Gene: 115487458
• Alliance
  gene page
• Transcription Start Sites
  11 TSS

Location &
Maps

• Sequence Map
  Chr10:69370120-69384592 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  513 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6365661	lncRNA gene	Chr10:69370120-69384592 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Sequences &
Gene Models

• All Sequences
  3
• RefSeq
  1

• NCBI Gene
  115487458

Representative Sequences			Length	Strain/Species
genomic	115487458	NCBI Gene Model | MGI Sequence Detail	14473	C57BL/6J
transcript	XR_003949008	RefSeq | MGI Sequence Detail	14426	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:90438 Mouse Genome Informatics Scientific Curators, Obtaining and loading genome assembly coordinates from NCBI annotations. 2005;

TSS for Gm51806:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr93937	Chr10:69369423-69369462 (+)	-677 bp
Tssr93938	Chr10:69369463-69369496 (+)	-640 bp
Tssr93939	Chr10:69369498-69369512 (+)	-615 bp
Tssr93940	Chr10:69369532-69369553 (+)	-577 bp
Tssr93941	Chr10:69369591-69369606 (+)	-521 bp
Tssr93942	Chr10:69369633-69369678 (+)	-464 bp
Tssr93943	Chr10:69369855-69369868 (+)	-258 bp
Tssr93944	Chr10:69369869-69369900 (+)	-235 bp
Tssr93945	Chr10:69369932-69369986 (+)	-161 bp
Tssr3235	Chr10:69370014-69370032 (+)	-97 bp
Tssr93946	Chr10:69370039-69370048 (+)	-76 bp