Gm52240 Gene Detail

Summary

• Symbol
  Gm52240
• Name
  predicted gene, 52240

• Feature Type
  lncRNA gene
• IDs
  MGI:6366339
  NCBI Gene: 115488631
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:18614692-18616117 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  24 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6366339	lncRNA gene	Chr16:18614692-18616117 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  2
• Endonuclease-mediated
  2
• Genomic Mutations
  2 involving Gm52240
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  3
• RefSeq
  1

• NCBI Gene
  115488631

Representative Sequences			Length	Strain/Species
genomic	115488631	NCBI Gene Model | MGI Sequence Detail	1426	C57BL/6J
transcript	XR_003953305	RefSeq | MGI Sequence Detail	227	C57BL/6J

References

• Summaries
  All 3

  Phenotypes 1
• Earliest
  J:304974 Saito R, et al., Two novel mouse models mimicking minor deletions in 22q11.2 deletion syndrome revealed the contribution of each deleted region to psychiatric disorders. Mol Brain. 2021 Apr 12;14(1):68