Gm51400 Gene Detail

Summary

• Symbol
  Gm51400
• Name
  predicted gene, 51400

• Feature Type
  protein coding gene
• IDs
  MGI:6468425
  NCBI Gene: 114841036
• Alliance
  gene page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr19:6954953-6957808 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6468425	protein coding gene	Chr19:6954953-6957808 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Sequences &
Gene Models

• All Sequences
  4
• RefSeq
  2
• CCDS
  CCDS89328.1

• NCBI Gene
  114841036

Representative Sequences			Length	Strain/Species
genomic	114841036	NCBI Gene Model | MGI Sequence Detail	2856	C57BL/6J
transcript	NM_001370419	RefSeq | MGI Sequence Detail	1842	ZRU/MplStud
polypeptide	NP_001357348	RefSeq | MGI Sequence Detail	266	ZRU/MplStud

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:155721 Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI), Consensus CDS project. Database Download. 2010;

TSS for Gm51400:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr157910	Chr19:6957788-6957849 (-)	-11 bp
Tssr157909	Chr19:6957242-6957264 (-)	555 bp
Tssr157908	Chr19:6956503-6956527 (-)	1,293 bp