Gadlorhg Gene Detail

Summary

• Symbol
  Gadlorhg
• Name
  Gata2 dependent long noncoding RNA host gene
• Synonyms
  Gm53260

• Feature Type
  lncRNA gene
• IDs
  MGI:6721593
  NCBI Gene: 118567341
• Alliance
  gene page
• Transcription Start Sites
  5 TSS

Location &
Maps

• Sequence Map
  Chr16:39805096-39845227 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1029 from dbSNP Build 142

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	no annotation
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Expression

• cDNA Data
  2

Sequences &
Gene Models

• All Sequences
  4
• RefSeq
  1

• NCBI Gene
  118567341

Representative Sequences			Length	Strain/Species
genomic	118567341	NCBI Gene Model | MGI Sequence Detail	40132	C57BL/6J
transcript	AK037972	GenBank | ENA | DDBJ | MGI Sequence Detail	2296	C57BL/6J

Molecular
Reagents

• All nucleic 2

  cDNA 2

Other
Accession IDs

MGI:7788976

References

• Summaries
  All 5
• Earliest
  J:359645 Froese N, et al., Endothelial Cell GATA2 Modulates the Cardiomyocyte Stress Response through the Regulation of Two Long Non-Coding RNAs. Biology (Basel). 2022 Nov 29;11(12)
• Latest
  J:359017 Keles M, et al., Endothelial derived, secreted long non-coding RNAs Gadlor1 and Gadlor2 aggravate cardiac remodeling. Mol Ther Nucleic Acids. 2024 Sep 10;35(3):102306

TSS for Gadlorhg:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr138431	Chr16:39804670-39804705 (+)	-408 bp
Tssr138432	Chr16:39804711-39804742 (+)	-369 bp
Tssr138433	Chr16:39804907-39804918 (+)	-183 bp
Tssr138434	Chr16:39804954-39804984 (+)	-127 bp
Tssr138435	Chr16:39839724-39839726 (+)	34,629 bp