Gm53648 Gene Detail

Summary

• Symbol
  Gm53648
• Name
  predicted gene, 53648

• Feature Type
  protein coding gene
• IDs
  MGI:6722341
  NCBI Gene: 118567871
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:104124281-104133619 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  39 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6722341	protein coding gene	Chr11:104124281-104133619 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  5
• Targeted
  5
• Genomic Mutations
  5 involving Gm53648
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  4
• RefSeq
  2

• NCBI Gene
  118567871

Representative Sequences			Length	Strain/Species
genomic	118567871	NCBI Gene Model | MGI Sequence Detail	9339	C57BL/6J
transcript	XM_036157116	RefSeq | MGI Sequence Detail	9135	C57BL/6J
polypeptide	XP_036013009	RefSeq | MGI Sequence Detail	727	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:347607 Benzow K, et al., Gene replacement-Alzheimer's disease (GR-AD): Modeling the genetics of human dementias in mice. Alzheimers Dement. 2024 Apr;20(4):3080-3087