Gm54266 Gene Detail

Summary

• Symbol
  Gm54266
• Name
  predicted gene, 54266

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:6723555
  NCBI Gene: 118568702
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr4:141391508-141393297 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  148 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6723555	protein coding gene	Chr4:141391208-141399053 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm54266
  

Expression

• cDNA Data
  1

Sequences &
Gene Models

• All Sequences
  12
• RefSeq
  6

• Ensembl
  ENSMUSG00000120187 (Evidence)
• NCBI Gene
  118568702

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120187	Ensembl Gene Model | MGI Sequence Detail	1790	C57BL/6J
transcript	ENSMUST00000245898	Ensembl | MGI Sequence Detail	1790	Not Applicable
polypeptide	XP_036020528	RefSeq | MGI Sequence Detail	199	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm54266:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr40091	Chr4:141391498-141391542 (+)	12 bp
Tssr40092	Chr4:141391552-141391560 (+)	48 bp