Rr117 Other Genome Feature Detail

Summary

• Symbol
  Rr117
• Name
  regulatory region 117
• Synonyms
  SBE1

• Feature Type
  enhancer
• IDs
  MGI:6836739

Location &
Maps

• Sequence Map
  Chr5:28664579-28665109 bp

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI
• chr5:28664579-28665109 (GRCm39)

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  69 from dbSNP Build 142

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype from 1 allele in 1 genetic background
  4 phenotypes from multigenic genotypes
  3 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Find Mice (IMSR)
  0 strains or lines available

References

• Summaries
  All 4

  Phenotypes 3
• Earliest
  J:170540 Jeong Y, et al., Spatial and temporal requirements for sonic hedgehog in the regulation of thalamic interneuron identity. Development. 2011 Feb;138(3):531-41
• Latest
  J:359453 Harke J, et al., Multiple allelic configurations govern long-range Shh enhancer-promoter communication in the embryonic forebrain. Mol Cell. 2024 Nov 14;