Gm54468 Gene Detail

Summary

• Symbol
  Gm54468
• Name
  predicted gene, 54468

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6845416
• Alliance
  gene page
• Transcription Start Sites
  4 TSS

Location &
Maps

• Sequence Map
  Chr14:61886087-61886223 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  66 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6845416	unclassified non-coding RNA gene	Chr14:61886087-61886223 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm54468
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00002076244 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076244	Ensembl Gene Model | MGI Sequence Detail	137	C57BL/6J
transcript	ENSMUST00020183609	Ensembl | MGI Sequence Detail	137	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm54468:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr125992	Chr14:61885809-61885814 (+)	-275 bp
Tssr125993	Chr14:61885863-61885879 (+)	-216 bp
Tssr125994	Chr14:61885884-61885894 (+)	-198 bp
Tssr125995	Chr14:61885905-61885914 (+)	-177 bp