Gm55716 Gene Detail

Summary

• Symbol
  Gm55716
• Name
  predicted gene, 55716

• Feature Type
  miRNA gene
• IDs
  MGI:6847899
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:10501602-10501725 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  21 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847899	miRNA gene	Chr2:10501602-10501725 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm55716
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm55716
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00002076560 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076560	Ensembl Gene Model | MGI Sequence Detail	124	C57BL/6J
transcript	ENSMUST00020182847	Ensembl | MGI Sequence Detail	124	Not Applicable

References

• Summaries
  All 5

  Phenotypes 4
• Earliest
  J:254511 Inoue K, et al., The Rodent-Specific MicroRNA Cluster within the Sfmbt2 Gene Is Imprinted and Essential for Placental Development. Cell Rep. 2017 May 2;19(5):949-956
• Latest
  J:338340 Wickramage I, et al., SINE RNA of the imprinted miRNA clusters mediates constitutive type III interferon expression and antiviral protection in hemochorial placentas. Cell Host Microbe. 2023 Jul 12;31(7):1185-1199.e10