Rr44608 Other Genome Feature Detail

Summary

• Symbol
  Rr44608
• Name
  regulatory region 44608
• Synonyms
  CB1, CBS1, ENSMUSR00000826637

• Feature Type
  CTCF binding site
• IDs
  MGI:6932830
• Regulates expression of
  Hoxd (1 regulated gene)

Location &
Maps

• Sequence Map
  Chr2:74546001-74546200 bp

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  96 from dbSNP Build 142

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  2
• Endonuclease-mediated
  2
• Find Mice (IMSR)
  0 strains or lines available

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:319862 Amandio AR, et al., Sequential in cis mutagenesis in vivo reveals various functions for CTCF sites at the mouse HoxD cluster. Genes Dev. 2021 Nov 1;35(21-22):1490-1509

Rr44608 regulates expression of:

Feature	Feature Type	Location	Reference
Hoxd, homeobox D cluster	complex/cluster/region	Chr2, Syntenic	J:319862