Gm56635 Gene Detail

Summary

• Symbol
  Gm56635
• Name
  predicted gene, 56635

• Feature Type
  lncRNA gene
• IDs
  MGI:7337184
• Alliance
  gene page
• Transcription Start Sites
  5 TSS

Location &
Maps

• Sequence Map
  Chr19:46488431-46489148 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  58 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337184	lncRNA gene	Chr19:46488431-46489148 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm56635
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000119991 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000119991	Ensembl Gene Model | MGI Sequence Detail	718	C57BL/6J
transcript	ENSMUST00000240957	Ensembl | MGI Sequence Detail	718	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56635:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr156757	Chr19:46488481-46488495 (+)	57 bp
Tssr156758	Chr19:46488606-46488636 (+)	190 bp
Tssr156759	Chr19:46488640-46488669 (+)	224 bp
Tssr156760	Chr19:46488673-46488698 (+)	255 bp
Tssr156761	Chr19:46489050-46489090 (+)	639 bp