Gm56768 Gene Detail

Summary

• Symbol
  Gm56768
• Name
  predicted gene, 56768

• Feature Type
  lncRNA gene
• IDs
  MGI:7337449
• Alliance
  gene page
• Transcription Start Sites
  10 TSS

Location &
Maps

• Sequence Map
  Chr14:54679606-54679902 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  82 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7337449	lncRNA gene	Chr14:54679606-54679902 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm56768
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000120849 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120849	Ensembl Gene Model | MGI Sequence Detail	297	C57BL/6J
transcript	ENSMUST00000246100	Ensembl | MGI Sequence Detail	297	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm56768:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr125640	Chr14:54678122-54678138 (+)	-1,476 bp
Tssr125641	Chr14:54678198-54678213 (+)	-1,400 bp
Tssr125642	Chr14:54678222-54678235 (+)	-1,377 bp
Tssr125643	Chr14:54678262-54678275 (+)	-1,337 bp
Tssr125644	Chr14:54678351-54678362 (+)	-1,249 bp
Tssr125645	Chr14:54678450-54678467 (+)	-1,147 bp
Tssr125646	Chr14:54678513-54678572 (+)	-1,063 bp
Tssr125647	Chr14:54678613-54678648 (+)	-975 bp
Tssr125648	Chr14:54679626-54679637 (+)	26 bp
Tssr125649	Chr14:54679779-54679795 (+)	181 bp