Gm57103 Gene Detail

Summary

• Symbol
  Gm57103
• Name
  predicted gene, 57103

• Feature Type
  lncRNA gene
• IDs
  MGI:7338119
• Alliance
  gene page
• Transcription Start Sites
  6 TSS

Location &
Maps

• Sequence Map
  Chr4:41314960-41320630 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  214 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338119	lncRNA gene	Chr4:41314960-41320630 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm57103
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000120740 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120740	Ensembl Gene Model | MGI Sequence Detail	5671	C57BL/6J
transcript	ENSMUST00000245488	Ensembl | MGI Sequence Detail	687	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57103:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr36855	Chr4:41314901-41314914 (+)	-52 bp
Tssr36856	Chr4:41314922-41314970 (+)	-14 bp
Tssr36857	Chr4:41316799-41316807 (+)	1,843 bp
Tssr36858	Chr4:41316809-41316830 (+)	1,860 bp
Tssr36859	Chr4:41316839-41316848 (+)	1,884 bp
Tssr36860	Chr4:41316855-41316861 (+)	1,898 bp