Rr307 Other Genome Feature Detail

Summary

• Symbol
  Rr307
• Name
  regulatory region 307
• Synonyms
  CNS9

• Feature Type
  enhancer
• IDs
  MGI:7367587
• Regulates expression of
  Rorc (1 regulated gene)

Location &
Maps

• Sequence Map
  Chr3:94290698-94292800 bp

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI
• J:305606 sgRNAs: chr3:94290698-94292800

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Find Mice (IMSR)
  0 strains or lines available

References

• Summaries
  All 2

  Phenotypes 2
• Earliest
  J:305606 Chang D, et al., The Conserved Non-coding Sequences CNS6 and CNS9 Control Cytokine-Induced Rorc Transcription during T Helper 17 Cell Differentiation. Immunity. 2020 Sep 15;53(3):614-626.e4
• Latest
  J:335145 Chang D, et al., A cis-element at the Rorc locus regulates the development of type 3 innate lymphoid cells. Front Immunol. 2023;14:1105145

Rr307 regulates expression of:

Feature	Feature Type	Location	Reference
Rorc, RAR-related orphan receptor gamma	protein coding gene	Chr3:94280106-94305583 (+)	J:305606