Rr384 Other Genome Feature Detail

Summary

• Symbol
  Rr384
• Name
  regulatory region 384
• Synonyms
  Nanog -5 enhancer

• Feature Type
  enhancer
• IDs
  MGI:7439426
• Regulates expression of
  Nanog (1 regulated gene)

Location &
Maps

• Sequence Map
  Chr6:122679163-122680499 bp

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI
• J:333571: chr6:122652222-122653558 (NCBIm37) chr6:122679163-122680499 (GRCm39)

• Genetic Map
  Chromosome 6, Syntenic

Strain
Comparison

• SNPs within 2kb
  103 from dbSNP Build 142

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Find Mice (IMSR)
  0 strains or lines available

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:333571 Blinka S, et al., Super-Enhancers at the Nanog Locus Differentially Regulate Neighboring Pluripotency-Associated Genes. Cell Rep. 2016 Sep 27;17(1):19-28

Rr384 regulates expression of:

Feature	Feature Type	Location	Reference
Nanog, Nanog homeobox	protein coding gene	Chr6:122684448-122691592 (+)	J:333571