Gm57766 Gene Detail

Summary

• Symbol
  Gm57766
• Name
  predicted gene, 57766

• Feature Type
  lncRNA gene
• IDs
  MGI:7512486
  NCBI Gene: 118567333
• Alliance
  gene page
• Transcription Start Sites
  7 TSS

Location &
Maps

• Sequence Map
  Chr10:86136845-86165180 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  800 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7512486	lncRNA gene	Chr10:86136845-86165180 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Sequences &
Gene Models

• All Sequences
  3
• RefSeq
  1

• NCBI Gene
  118567333

Representative Sequences			Length	Strain/Species
genomic	118567333	NCBI Gene Model | MGI Sequence Detail	28336	C57BL/6J
transcript	XR_004936376	RefSeq | MGI Sequence Detail	10994	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:90438 Mouse Genome Informatics Scientific Curators, Obtaining and loading genome assembly coordinates from NCBI annotations. 2005;

TSS for Gm57766:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr94960	Chr10:86137050-86137052 (+)	206 bp
Tssr94961	Chr10:86145840-86145849 (+)	9,000 bp
Tssr94962	Chr10:86146798-86146819 (+)	9,964 bp
Tssr94963	Chr10:86146879-86146918 (+)	10,054 bp
Tssr94964	Chr10:86147092-86147119 (+)	10,261 bp
Tssr94965	Chr10:86147166-86147214 (+)	10,345 bp
Tssr94966	Chr10:86159751-86159756 (+)	22,909 bp