Gm57854 Gene Detail

Summary

• Symbol
  Gm57854
• Name
  predicted gene, 57854

• Feature Type
  protein coding gene
• IDs
  MGI:7512655
  NCBI Gene: 129135233
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:126399962-126408280 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  260 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7512655	protein coding gene	Chr7:126394406-126408321 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm57854
  

Sequences &
Gene Models

• All Sequences
  11
• RefSeq
  2
• UniProt
  2

• Ensembl
  ENSMUSG00000114515 (Evidence)
• NCBI Gene
  129135233

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114515	Ensembl Gene Model | MGI Sequence Detail	8319	C57BL/6J
transcript	ENSMUST00000207534	Ensembl | MGI Sequence Detail	741	Not Applicable
polypeptide	ENSMUSP00000147053	Ensembl | MGI Sequence Detail	138	Not Applicable

Protein
Information

• UniProt
  2 Sequences

References

• Summaries
  All 4
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57854:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr74839	Chr7:126408306-126408403 (-)	-75 bp