Rr487 Other Genome Feature Detail

Summary

• Symbol
  Rr487
• Name
  regulatory region 487
• Synonyms
  Csn SE-E2

• Feature Type
  enhancer
• IDs
  MGI:7664499
• Member of
  Rr485 cluster
• Regulates expression of
  Csn1s1, Csn1s2b, Csn3 (3 regulated genes)

Location &
Maps

• Sequence Map
  Chr5:88024456-88025178 bp

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI
• chr5:88024456-88025178 (GRCm39)

• Genetic Map
  Chromosome 5, Syntenic

Strain
Comparison

• SNPs within 2kb
  144 from dbSNP Build 142

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Find Mice (IMSR)
  0 strains or lines available

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:341588 Lee HK, et al., Cell-specific and shared regulatory elements control a multigene locus active in mammary and salivary glands. Nat Commun. 2023 Aug 17;14(1):4992

Rr487 regulates expression of:

Feature	Feature Type	Location	Reference
Csn1s1, casein alpha s1	protein coding gene	Chr5:87814067-87830437 (+)	J:341588
Csn1s2b, casein alpha s2-like B	protein coding gene	Chr5:87955980-87972280 (+)	J:341588
Csn3, casein kappa	protein coding gene	Chr5:88073438-88080409 (+)	J:341588