Rr550 Other Genome Feature Detail

Summary

• Symbol
  Rr550
• Name
  regulatory region 550
• Synonyms
  SRR1

• Feature Type
  enhancer
• IDs
  MGI:7716976
• Regulates expression of
  Sox2 (1 regulated gene)

Location &
Maps

• Sequence Map
  Chr3:34700326-34700717 bp

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI
• chr3:34700326-34700717 (GRCm39)

• Genetic Map
  Chromosome 3, Syntenic

Strain
Comparison

• SNPs within 2kb
  49 from dbSNP Build 142

References

• Summaries
  All 3
• Earliest
  J:62026 Zappone MV, et al., Sox2 regulatory sequences direct expression of a (beta)-geo transgene to telencephalic neural stem cells and precursors of the mouse embryo, revealing regionalization of gene expression in CNS stem cells. Development. 2000 Jun;127(11):2367-82
• Latest
  J:353669 Zhou HY, et al., A Sox2 distal enhancer cluster regulates embryonic stem cell differentiation potential. Genes Dev. 2014 Dec 15;28(24):2699-711

Rr550 regulates expression of:

Feature	Feature Type	Location	Reference
Sox2, SRY (sex determining region Y)-box 2	protein coding gene	Chr3:34704554-34706610 (+)	J:353669