Rr551 Other Genome Feature Detail

Summary

• Symbol
  Rr551
• Name
  regulatory region 551
• Synonyms
  CTCF Motif 1

• Feature Type
  CTCF binding site
• IDs
  MGI:7718668
• Regulates expression of
  Map3k6 (1 regulated gene)

Location &
Maps

• Sequence Map
  Chr4:132978132-132978150 bp

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI
• J:342647: chr4:133250769-133250879 (mm10) chr4:132978080-132978190 (GRCm39) of which motif CAGCGCCCCCTGGTGGTCG is 132978132-132978150

• Genetic Map
  Chromosome 4, Syntenic

Strain
Comparison

• SNPs within 2kb
  108 from dbSNP Build 142

References

• Summaries
  All 2
• Earliest
  J:342647 Chakraborty S, et al., Enhancer-promoter interactions can bypass CTCF-mediated boundaries and contribute to phenotypic robustness. Nat Genet. 2023 Feb;55(2):280-290

Rr551 regulates expression of:

Feature	Feature Type	Location	Reference
Map3k6, mitogen-activated protein kinase kinase kinase 6	protein coding gene	Chr4:132968129-132980240 (+)	J:342647