Gm57983 Gene Detail

Summary

• Symbol
  Gm57983
• Name
  predicted gene, 57983

• Feature Type
  lncRNA gene
• IDs
  MGI:7799093
• Alliance
  gene page
• Transcription Start Sites
  8 TSS

Location &
Maps

• Sequence Map
  ChrY:90751188-90751649 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome Y, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7799093	lncRNA gene	ChrY:90751188-90751649 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm57983
  

Sequences &
Gene Models

• All Sequences
  3

• Ensembl
  ENSMUSG00000133777 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000133777	Ensembl Gene Model | MGI Sequence Detail	462	C57BL/6J
transcript	ENSMUST00000320742	Ensembl | MGI Sequence Detail	282	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57983:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr5759	ChrY:90749422-90749464 (+)	-1,745 bp
Tssr5760	ChrY:90749532-90749546 (+)	-1,649 bp
Tssr5761	ChrY:90749550-90749559 (+)	-1,633 bp
Tssr5762	ChrY:90749571-90749589 (+)	-1,608 bp
Tssr5763	ChrY:90749611-90749641 (+)	-1,562 bp
Tssr5764	ChrY:90749642-90749654 (+)	-1,540 bp
Tssr5765	ChrY:90749732-90749765 (+)	-1,439 bp
Tssr5768	ChrY:90749885-90749898 (+)	-1,296 bp